Jeffrey Jensen

15 Representative Publications from the past decade (lab members in bold)

• Johri P, C Aquadro, M Beaumont, B Charlesworth, L Excoffier, A Eyre-Walker, P Keightley, M Lynch, G McVean, B Payseur, S Pfeifer, W Stephan, and JD Jensen, 2022. Recommendations for improving statistical inference in population genomics. PLOS Biology.
• Charlesworth B, and JD Jensen, 2022. How can we resolve Lewontin's Paradox? Genome Biology & Evolution.
• Johri P, K Riall, H Becher, L Excoffier, B Charlesworth, and JD Jensen, 2021. The impact of purifying and background selection on the inference of population history. Molecular Biology & Evolution.
• Charlesworth B, and JD Jensen, 2021. Effects of selection at linked sites on patterns of genetic variability. AREES.
• Johri P, B Charlesworth, and JD Jensen, 2020. Towards an evolutionarily appropriate null model: jointly inferring demography and purifying selection. Genetics. 
• Jensen JD, R Stikeleather, T Kowalik, and M Lynch, 2020. Imposed mutational meltdown as an antiviral strategy. Evolution.
• Sackman A, R Harris, and JD Jensen, 2019. Inferring demography and selection in organisms characterized by skewed offspring distributions. Genetics.
• Jensen JD, BA Payseur, W Stephan, CF Aquadro, M Lynch, D Charlesworth, and B Charlesworth, 2019. The importance of the Neutral Theory in 1968 and 50 years on. Evolution.​
• Harris R, A Sackman, and JD Jensen, 2018. On the unfounded enthusiasm for soft selective sweeps II: examining recent evidence from humans, flies, and viruses. PLOS Genetics.
• Matuszewski S, M Hildebrandt, G Achaz, and JD Jensen, 2018. Coalescent processes with skewed offspring distributions and non-equilibrium demography. Genetics.
• Pfeifer S, S Laurent, V Sousa, C Linnen, M Foll, L Excoffier, H Hoekstra, and JD Jensen, 2018. The evolutionary history of Nebraska deer mice: local adaptation in the face of strong gene flow. Molecular Biology & Evolution.
• Renzette N, S Pfeifer, S Matuszewski, T Kowalik, and JD Jensen, 2017. On the analysis of intra-host and inter-host viral populations: human cytomegalovirus as a case study of pitfalls and expectations. Journal of Virology.
• Bank C, S Matuszewski, R Hietpas, and JD Jensen, 2016. On the (un)predictability of a large intragenic fitness landscape. PNAS.
• Bank C, R Hietpas, A Wong, D Bolon, and JD Jensen, 2014. A Bayesian MCMC approach to assess the complete distribution of fitness effects of new mutations: uncovering the potential for adaptive walks in challenging environments. Genetics.
• Foll M, YP Poh, N Renzette, A Ferrer-Admetlla, H Shim, AS Malaspinas, G Ewing, C Bank, P Liu, D Wegmann, D Caffrey, K Zeldovich, D Bolon, J Wang, T Kowalik, C Schiffer, R Finberg, and JD Jensen, 2014. Influenza drug resistance: a time-sampled population genetics perspective. PLOS Genetics.