Susanne Pfeifer

Representative publications from 2023: (lab members indicated; * authors contributed equally)​

• A.A. Howell*, C.J. Versoza*, S.P. Pfeifer. 2023. Computational host range prediction – the good, the bad, and the ugly. Virus Evol., vead083. Online ahead of print.
• C.J. Versoza*, S. Weiss*, R. Johal, B. La Rosa, J.D. Jensen, S.P. Pfeifer. 2023. Novel insights into the landscape of crossover and non-crossover events in rhesus macaques (Macaca mulatta). Genome Biol. Evol., evad223. Online ahead of print.
• M. Moström, S. Yu, D. Tran, F. Saccoccio, C.J. Versoza, D. Malouli, S. Valencia, M. Gilbert, R. Blair, S. Hansen, P. Barry, K. Früh, J.D. Jensen, S.P. Pfeifer, T. Kowalik, S. Permar, A. Kaur. 2023. Protective effect of pre-existing natural immunity in a nonhuman primate reinfection model of congenital cytomegalovirus infection. PLoS Pathogens, 19(10): e1011646. pdf 
• A.A. Howell, J. Terbot, V. Soni, P. Johri, J.D. Jensen, S.P. Pfeifer. 2023. Developing an appropriate evolutionary baseline model for the study of human cytomegalovirus. Genome Biol. Evol., 15(4): evad059. pdf 
• S. Ghafoor*, C.J. Versoza*, J. Santos*, J.D. Jensen, S.P. Pfeifer. 2023. The impact of sample size and population history on observed mutational spectra. Genome Biol. Evol., 15(3): evad019. pdf
• M. Milhaven, C.J. Versoza, A. Garg, L. Cai, S. Cherian, K. Johnson, K. Salas Perez, M. Blanco, J. Lobatos, C. Mitra, M. Strasser, S.P. Pfeifer. 2023. Bacteriophages of cluster EA: phylogenomic relationships and host range predictions. Microorganisms. 11(1): 170. pdf
• M. Milhaven, L. Cai, S. Cherian, K. Johnson, K. Salas Perez, M. Blanco, A. Garg, J. Lobatos, C. Mitra, M. Strasser, R. Harms, S.P. Pfeifer. 2023. Complete genome sequence of the Microbacterium bacteriophage Chako. Microbiol. Resour. Announc., 12(2): e0125122. pdf 
• M. Milhaven & S.P. Pfeifer. 2023. Performance comparison of six popular short-read simulators. Heredity, 130(2): 55–63. pdf