Hinsby Cadillo-Quiroz
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Phone: 480-965-4482
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LSE 723 School of Life Sciences, Arizona State University 427 East Tyler Mall Tempe, AZ 85287
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Mail code: 4501Campus: Tempe
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Hinsby Cadillo-Quiroz studies how microbes participate in an ecosystem and in applied processes. He and his research team are investigating whether microbe-mediated organismal and environmental interactions drive ecosystem processes, particularly carbon cycling. They are also examining how ecosystems, in turn, affects the ecology and evolution of microorganisms and tehir interactions.
Dr Cadillo-Quiroz and his collaborators focus on methane-producing processes from anaerobic, high carbon-content environments, as well as the ecological interactions between Archaea, Bacteria, plants and humans. This knowledge can allow developing small and large scale solutions for current societal or planetary needs. For instance, Dr Cadillo-Quiroz is strongly committed to natural and engineered solutions to climate change through the power of cooperating with microbes.
Dr Cadillo-Quiroz’s current research studies processes in landfills, artificial wetlands, lakes and ponds, northern USA forest, and tropical peatlands in the Amazon Basin. He has been recognized with a Fulbright Scholarship, a Presidential Scholarship at Cornell University, a National Science Foundation CAREER Award, and an Honorific Doctorate in Forestry by the National University of the Peruvian Amazon.
Please see team website for updated research and outreach activities
- PhD Microbiology and minor in Ecology, Cornell University 2008
- BS Biological Sciences, San Marcos National University, Lima, Peru 1999
Ecology, Evolution, microbial communities, Archaea, methane production, genomics, metagenomics, applied microbiology, microbial ecology, peatlands, amazon rainforest, carbon cycle, methane transformation to bienergy, insect microbiome, astrobiology, microbes and origing of life, life at the edge of energetics
- Reynolds, M.C. *, Delkash, M., Karimi, S., Pandit, G., Winston, J., Lopez, J.G., Allen, R., Krajmalnik-Brown,R., Cadillo-Quiroz, H. 2023. Improved CH4 production from solid waste under zero valent metal amendments. Environ. Sci. Technol. Engineering (submitted)
- Pavia, M.J. *, Garber, A. I., Cole, S., Macedo-Tafur, F., Tello-Espinoza,R., Cadillo-Quiroz, H. 2023. New clusters and putative roles of Bathyarchaeota in Tropical Peatlands of the Peruvian Amazon. Microorganisms Journal (in submission).
- Pérez-Castillo, G., Monge-Muñoz, M., Durán-Quesada, A.M., Giraldo-Sanclemente,, W., Méndez-Esquivel, A.C., Briceño, N., Cadillo-Quiroz, H. 2023. State and carbon loss of the Medio Queso Wetland, a fire degraded tropical fluvial peatland in Costa Rica. Wetlands (in submission).
- Yuan, F., Ricciuto, D. M., Xu, X., Roman, D. T., Lilleskov, E., Wood, J. D., Cadillo-Quiroz, H., Lafuente, A., Kolka, R., Fachin, L., Hergoualc’h, K., Chimner, R. A., Frie, A., Griffis, T. J. 2022. Evaluation and improvement of the E3SM land model for simulating energy and carbon fluxes in an Amazonian peatland. Agricultural and Forest Meteorology (Accepted)
- Pavia, M.J.*, Finn, D., Macedo-Tafur, F., Tello-Espinoza, R., Pennaccio, C., Bouskill, N., Cadillo-Quiroz, H. 2022. Genes and genome-resolved metagenomics reveal the microbial functional make up of Amazon peatlands under geochemical gradients. Environmental Microbiology Journal (In revision).
- Cadillo-Quiroz, H. and Reynolds, M.* 2022. Microbial DNA sample preservation and possible artifacts for field-based research in remote tropical peatlands. Methods X (submitted).
- Pavia, M.J. *, Chede, A., Wu, Z., Cadillo-Quiroz, H., & Zhu, Q. 2022. Binarena: a dedicated interactive platform for human-guided exploration and binning of metagenomes. Microbiomes Journal (In Review)
- Pavlopoulos,G., Baltoumas, F., Liu, S., Selvitopi, O., Nayfach, S., Azad, A., Call, L., Camargo, A., Ivanova, N., Chen, I., Paez-Espino, D., Karatzas, E., Novel Metagenome Protein Families Consortium- Cadillo-Quiroz, H. et. al. 2022. Discovery, diversity and distribution of functional dark matter through global metagenomics. Nature Biotechnology (submitted)
- Buessecker, S.*, H. Imanaka, T. Ely, R. Hu, S.J. Romaniello and H. Cadillo-Quiroz. 2022. Marine mineral-catalyzed NO and N2O formation on the anoxic early Earth. Nature Goesciences (Accepted).
- Buessecker, S. *, Ostrom, N., Gücker, B., Urquiza-Muñoz, J., Penton, R., Pérez, A., Boëchat, I., Holbert, K., Panduro Pisco, G., Sarno, A. Fontanez Ortiz, M. and Reynolds, M. Cadillo-Quiroz, H. 2022. Coupled abiotic-biotic cycling of nitrous oxide in tropical peatlands. Nature Ecology and Evolution (online)
- Melton, Joe., Ed Chan, Koreen Millard, Matthew Fortier, Scott Winton, Javier M. Martín-López, Hinsby Cadillo-Quiroz, Darren Kidd, and Louis V. Verchot. 2022. A map of global peatland extent created using machine learning. Geoscientific Model Development , 15 (12): 4709–4738
- Reynolds, M. *, Finn, D., Sarno. A., Allen, R., Deathrage, D., Krajmalnik-Brown, Cadillo-Quiroz, H*. 2022. Delineating the drivers and functionality of methanogenic niches within an arid landfill. Applied and Environmental Microbiology, 88(9): e02438-21
- Dwivedi, D., A.L.D. Santos, M.A. Barnard, T.M. Crimmins, A. Malhotra, K.A. Rod, K.S. Aho, S.M. Bell, B. Bomfim, F.Q. Brearley, H. Cadillo-Quiroz, J. Chen, C.M. Gough, E.B. Graham, C.R. Hakkenberg, L. Haygood, G. Koren, E. Lilleskov, L.K. Meredith, S. Naeher, Z.L. Nickerson, O. Pourret, H.-S. Song, M. Stahl, N. Tas, R. Vargas, and S. Weintraub-Leff. 2022. Biogeosciences Perspectives on Integrated, Coordinated,Open, Networked (ICON) Science. Earth and Space Science, 9, e2021EA002119.
- Reed MS, Young DM, Andersen R, Bell NGA, Cadillo-Quiroz, H, Grainger M, Heinemeyer A, Hergoualc’h K, Gerrand AM, Kieft J, Krisnawati H, Lilleskov EA, Melling L, Sjogersten S, Taylor NG, Walker JS, Stewart G, 2022. Peatland core common outcomes: developing a consensus on what should be measured in research and monitoring. Peat and Mire, 28, 26, 21pp
- Glaser, D., Hartnett, H., Finn, D., Perez-Montaño, S., Cadillo-Quiroz, H. and Desch S. 2022. Water Vapor Adsorption Provides Daily, Sustainable Water to Soils of the Hyperarid Atacama Desert. Astrobiology. 22 (10)
- Saatchi, S., Longo, M., Xu, L., Yang, Y., Abe, H., Andre, M Aukema, J., Carlvahais, N., Cadillo-Quiroz, H., …et al. 2021. Detecting vulnerability of humid tropical forests to multiple stressors. One Earth 4(7): 988-1003.
- van Haren, J., Brewer, P*., Kurtzberg, L., Weiss, R., Springer, V., Tello-Espinoza, R., Solignac Ruiz, J., Cadillo-Quiroz H. 2021. A versatile gas flux chamber reveals high tree stem methane emissions in Amazonian peatland. Agricultural Forestry and Meteorology 307: 108504
- Buessecker, S*, Zamora , Z., Sarno, A., D. R. Finn , A. M. Hoyt , J. van Haren , J. D. Urquiza Muñoz , and Cadillo-Quiroz, H.* 2021. Microbial communities and interactions of nitrogen oxides with methanogenesis in diverse peatlands of the Amazon basin. Frontiers in Microbiology 12(1564).
- Neri, U., Wolf, Y.I.,...... RNA Virus Discovery Consortium: H. Cadillo-Quiroz....Gophna, U. 2020. Expansion of the global RNA virome reveals diverse clades of bacteriophages. Cell, 185 (21), 4023-4037.e18
- Nayfach, S. Roux S......IMG/M Data Consortium: H. Cadillo-Quiroz....Eloe-Fadrosh, E. 2020. A genomic catalog of Earth's microbiomes. Nature Biotechnology 39(4): 499-509
- Griffis, T., Roman, T., Wood, J., Deventer, J., Malaverri, L., Rengifo, M., del Castillo, Torres, J., Lilleskov,E., Kolka, R., Chimner, R., Wayson, C., Hergoualc'h, K., Baker, J., Ricciuto, D., Cadillo-Quiroz, H. Ricciouto D.M.. 2020. Hydrometeorological sensitivities of net ecosystem carbon dioxide and methane exchange of an Amazonian palm swamp peatland. Agricultural and Forest Meteorology 295: 108167.
- Finn D. *, Ziv-El M. *, van Haren J., Park J., del Aguila Pasquel, J.,Urquiza-Muñoz, D.,Cadillo- Quiroz H. 2020. Methanogens and Methanotrophs Show Nutrient-Dependent Community Assemblage Patterns Across Tropical Peatlands of the Pastaza-Marañón Basin, Peruvian Amazonia. Frontiers in Microbiology, 2020, 11:746
- Apai, D., Banzatti, A., Ballering, N. P., Bergin, E. A., Bixel, A., Birnstiel, T., Bose, M., Brittain, S., Cadillo-Quiroz, H., … Young, P. 2019. Planetary Habitability Informed by Planet Formation and Exoplanet Demographics. Bulletin of the AAS. Retrieved from https://baas.aas.org/pub/2020n3i475
- Buessecker*, S.,Tylor, K., Nye, J., Holbert, H.K., Urquiza, J.D., Hartnett, H.E., Glass, J.B., and H. Cadillo-Quiroz*. 2019. The effects of sterilization and inhibition methods on abiotic N2O production from organic-rich tropical soils. Biogeosciences, 16:4601–4612
- Wang, S., Zhuang, Q., Lähteenoja, O.*, Draper, F. and Cadillo-Quiroz, H*. 2018. A potential shift from a carbon sink to a source in Amazonian peatlands under a changing climate. Proceedings of the National Academy of Sciences. 115: 12407-12412.
- Zhang, G., Browne, P. *, Geng, Z., Cadillo-Quiroz, H., Franz, F. 2017. Diversity and evolution of bacterial symbionts of weevils (Insecta: Curculionoidea). BioXrv doi: https://doi.org/10.1101/171181.
- Chapman, E.J., Cadillo-Quiroz, H., Childers, D.L., Turetsky, M.R., and. Waldrop, M. 2017. Soil microbial community composition is correlated to soil carbon processing along a boreal wetland formation gradient European Journal of Soil Biology 82: 17-26.
- C.X. She, Z.C. Zeng, H. Cadillo-Quiroz*, C. Tong*. 2017. Changes of community structure and abundance of methanogens in soils along a freshwater–brackish water gradient in subtropical estuarine marshes. Geoderma 299: 101:110.
- Browne, P., Kyrpides, N., Woyke, T., Goodwin, L., Detter, C., Tamaki, H., Liu, W., Zinder, S., Cadillo-Quiroz, H. 2017. Genomic composition and dynamics among Methanomicrobiales predict adaptation to contrasting environments. The ISME Journal: 11:87-99.
- Zinder S. and Cadillo-Quiroz*, H. 2016. Methanosphaerula. Bergey’s Manual of Systematics of Archaea and Bacteria. 1-5 p, Published by John Wiley & Sons, Inc., in association with Bergey's Manual Trust.
- C.X. She, Z.C. Zhang, H. Cadillo-Quiroz*, C. Tong*. 2016. Factors regulating community composition of methanogens and sulfate-reducing bacteria in brackish marsh sediments in the Min River estuary, southeastern China. Estuaries, Coasts and Shelf Sciences 181: 27-38
- Cadillo-Quiroz, H.*, Browne, P*., Kyrpides, N., Woyke, T., Goodwin, L., Detter, C., Yavitt, J. and Zinder, S. 2015. Complete genome sequence of Methanosphaerula palustris E1-9CT, a hydrogenotrophic methanogen isolated from a minerotrophic fen peatland. Genome Announcements 3 (6), e01280-15.
- Baran, R., Brodie, E., Mayberry-Lewis, M.*, Hummel, E*. Nunes Da Rocha, U., Chakraborty, R., Bowen, B., Karaoz, U., Cadillo-Quiroz, H., Garcia-Pichel, F., Northen, T. 2015. Exometabolite niche partitioning among sympatric soil bacteria. Nature communications 6: 8289
- Brauer S., Cadillo-Quiroz, H., Kyrpides, H., Woyke, T., Goodwin, L., Podell, S., Yavitt, J., Zinder, H. 2015. Genome of Methanoregula boonei reveals adaptation to oligotrophic peatlands environments. SGM Microbiology 161:1572-1581. [
- Nunes da Rocha, U., Cadillo-Quiroz, H., Karaoz, U., Rajeev, Lara., Klitgord, N., Dunn, S. *, Truong, V. *, Buenrostro, M. *, Bowen, B., Garcia-Pichel, F., Mukhopadhyay, A., Northen, T. and Brodie, E. 2015. Isolation of a significant fraction of non-phototroph diversity from a desert Biological Soil Crust. Frontiers in Microbiology 6: 277
- Krause D., Didelot, X., Cadillo-Quiroz, H., Whitaker, R. 2014. Recombination shapes genome architecture in an organism from the Archaeal domain. Genome Biology and Evolution 6(1): 170-178.
- Cadillo-Quiroz, H*., Brauer, S. Goodson, N. Yavitt, J., and Zinder, S.H. 2014. Methanobacterium paludis sp. nov., and a novel strain of Methanobacterium lacus isolated from northern peatlands. International Journal of Systematic and Evolutionary Microbiology 5: 1473-1480
- Yamamoto, K., Tamaki, H., Cadillo-Quiroz, H., Imachi, H., Kyrpides, N., Woyke, T., Goodwin, T., Zinder, S., Kamagata, Y., Wen-Tso, L. 2014. Complete genome sequence of Methanoregula formicica SMSPT, a mesophilic hydrogenotrophic methanogen isolated from a methanogenic upflow anaerobic sludge blanket reactor. Genome Announcements 2(5): e00870-14.
- Yamamoto, K., Tamaki, H., Cadillo-Quiroz, H., Imachi, H., Kyrpides, N., Woyke, T., Goodwin, T., Zinder, S., Kamagata, Y., Wen-Tso, L. 2014. Complete genome sequence of Methanolinea tarda NOBI-1T, a hydrogenotrophic methanogen isolated from methanogenic digester sludge. Genome Announcements 2(5): e00876-14.
- Browne, P. and Cadillo-Quiroz, H. 2013. Contribution of transcriptomics to systems-level understanding of methanogenic Archaea. Archaea, Vol 2013: 11 p, Article ID 586369, DOI: 10.1155/2013/586369
- Bridgham, S., Cadillo-Quiroz, H., Keller, J., Zhuang, Q. 2013. Methane emissions from wetlands: biogeochemical, microbial, and modeling perspectives from local to global scales. Global Change Biology 19:1325-1346
- DOE BER. Biophysical processes and feedback mechanisms controlling the methane budget of an Amazonian peatland. Co-Investigator. Team Lead by Timothy Griffiths at Minnesota State University. 09/2019-08/2023
- Industrial Partner Funded project within the Center for Bio-mediated & Bio-inspired Geotechnics (CBBG). Title “Monitoring the changes in methane (CH4) emissions and microbes of manipulated cells of the Salt River Landfill, an Arid Zone Landfill case study (SRL)”. Awarded. PI. 10/2019-10/2023.
- NSF-CAREER: Geochemical and functional controls of methane-mediating microbes in Amazon peatlands. PI. Awarded. 2/1/2018- 1/31/2023
- NSF LTER: CAP IV - Investigating urban ecology and sustainability through the lens of Urban Ecological Infrastructure. Investigator. 12/1/2018 - 11/30/2022. Awarded.
- NSF- Engineering Research center. Center for Bio-mediated & Bio-inspired Geotechnics. Co-I. 08/01/2015-07/31/2025. Awarded.
- USAID-NAS: PEER: Multi-Scale, Interdisciplinary Integrated Analysis of Societal and Ecosystem Values or Peruvian Amazon Peatlands. International project partner.
- NATIONAL GEOGRAPHIC SOCIETY: The hydrologic effects of alluvial gold mining in western Amazonia and their implications for mercury and greenhouse gas. PI. 04-2022/05-2024.
- NSF-DEB. Collaborative Research: Understanding biophysical drivers of the CH4 source sink transition in Northern Forest. Co-Investigator. Proposed period 08/2022-07/2025.
Pending
- NSF BII-Implementation: BioGas: the BioInstitute for the Biological Production of Greenhouse gases. Co-PI. Proposed Period 09/2023-08/2029.
- DOE BER: Developing a methane-centered classification of Amazon peatlands to assess the effects of hydro geochemical variation in a key regional CH4 hotspot in the wester Amazonia. Lead PI. Proposed period 09/2023-08/2026.
Courses
2025 Spring
Course Number | Course Title |
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BIO 493 | Honors Thesis |
MIC 493 | Honors Thesis |
MIC 495 | Undergraduate Research |
MIC 220 | Biology of Microorganisms |
MBB 495 | Undergraduate Research |
BIO 495 | Undergraduate Research |
BDE 799 | Dissertation |
MIC 220 | Biology of Microorganisms |
BDE 792 | Research |
BDE 795 | Continuing Registration |
BDE 799 | Dissertation |
2024 Fall
Course Number | Course Title |
---|---|
BCH 392 | Intro to Research Techniques |
BCH 492 | Honors Directed Study |
BCH 493 | Honors Thesis |
BIO 492 | Honors Directed Study |
BIO 493 | Honors Thesis |
CHM 392 | Intro to Research Techniques |
CHM 492 | Honors Directed Study |
MBB 492 | Honors Directed Study |
MIC 492 | Honors Directed Study |
MIC 495 | Undergraduate Research |
BIO 495 | Undergraduate Research |
MBB 495 | Undergraduate Research |
CHM 493 | Honors Thesis |
BCH 392 | Intro to Research Techniques |
CHM 392 | Intro to Research Techniques |
MIC 470 | Bacterial Diversity/Systematic |
MIC 470 | Bacterial Diversity/Systematic |
MIC 598 | Special Topics |
MIC 598 | Special Topics |
2024 Summer
Course Number | Course Title |
---|---|
BDE 792 | Research |
BIO 495 | Undergraduate Research |
2024 Spring
Course Number | Course Title |
---|---|
BIO 493 | Honors Thesis |
MIC 493 | Honors Thesis |
MIC 495 | Undergraduate Research |
MIC 220 | Biology of Microorganisms |
MBB 495 | Undergraduate Research |
BIO 495 | Undergraduate Research |
BDE 799 | Dissertation |
MIC 220 | Biology of Microorganisms |
BDE 792 | Research |
BDE 795 | Continuing Registration |
BDE 799 | Dissertation |
2023 Fall
Course Number | Course Title |
---|---|
BIO 492 | Honors Directed Study |
BIO 493 | Honors Thesis |
MBB 492 | Honors Directed Study |
MIC 492 | Honors Directed Study |
MIC 495 | Undergraduate Research |
BIO 495 | Undergraduate Research |
MBB 495 | Undergraduate Research |
MIC 494 | Special Topics |
2023 Summer
Course Number | Course Title |
---|---|
BDE 792 | Research |
BIO 495 | Undergraduate Research |
MIC 495 | Undergraduate Research |
2023 Spring
Course Number | Course Title |
---|---|
BIO 493 | Honors Thesis |
MIC 493 | Honors Thesis |
MIC 495 | Undergraduate Research |
MIC 220 | Biology of Microorganisms |
MBB 495 | Undergraduate Research |
BIO 495 | Undergraduate Research |
BDE 799 | Dissertation |
MIC 220 | Biology of Microorganisms |
BDE 792 | Research |
MIC 494 | Special Topics |
BDE 795 | Continuing Registration |
BDE 799 | Dissertation |
2022 Fall
Course Number | Course Title |
---|---|
BIO 492 | Honors Directed Study |
BIO 493 | Honors Thesis |
MBB 492 | Honors Directed Study |
MIC 492 | Honors Directed Study |
MIC 495 | Undergraduate Research |
BIO 495 | Undergraduate Research |
MBB 495 | Undergraduate Research |
MIC 470 | Bacterial Diversity/Systematic |
MIC 470 | Bacterial Diversity/Systematic |
MIC 598 | Special Topics |
MIC 598 | Special Topics |
2022 Summer
Course Number | Course Title |
---|---|
BDE 792 | Research |
BIO 495 | Undergraduate Research |
2022 Spring
Course Number | Course Title |
---|---|
BIO 493 | Honors Thesis |
MIC 493 | Honors Thesis |
MIC 495 | Undergraduate Research |
MIC 220 | Biology of Microorganisms |
MBB 495 | Undergraduate Research |
BIO 495 | Undergraduate Research |
BDE 799 | Dissertation |
MIC 220 | Biology of Microorganisms |
BDE 792 | Research |
MIC 494 | Special Topics |
BDE 792 | Research |
BDE 795 | Continuing Registration |
BDE 799 | Dissertation |
2021 Fall
Course Number | Course Title |
---|---|
BIO 492 | Honors Directed Study |
BIO 493 | Honors Thesis |
MBB 492 | Honors Directed Study |
MIC 492 | Honors Directed Study |
MIC 495 | Undergraduate Research |
BIO 495 | Undergraduate Research |
MBB 495 | Undergraduate Research |
MIC 470 | Bacterial Diversity/Systematic |
MIC 470 | Bacterial Diversity/Systematic |
MIC 598 | Special Topics |
2021 Summer
Course Number | Course Title |
---|---|
BDE 792 | Research |
BIO 495 | Undergraduate Research |
2021 Spring
Course Number | Course Title |
---|---|
BIO 493 | Honors Thesis |
MIC 493 | Honors Thesis |
MIC 495 | Undergraduate Research |
MIC 220 | Biology of Microorganisms |
MBB 495 | Undergraduate Research |
BIO 495 | Undergraduate Research |
BDE 799 | Dissertation |
MIC 220 | Biology of Microorganisms |
BDE 792 | Research |
MIC 494 | Special Topics |
2020 Fall
Course Number | Course Title |
---|---|
BIO 492 | Honors Directed Study |
BIO 493 | Honors Thesis |
MBB 492 | Honors Directed Study |
MIC 495 | Undergraduate Research |
BIO 495 | Undergraduate Research |
MBB 495 | Undergraduate Research |
MIC 494 | Special Topics |
2020 Summer
Course Number | Course Title |
---|---|
BDE 792 | Research |
BIO 495 | Undergraduate Research |
MIC 495 | Undergraduate Research |
2020 Spring
Course Number | Course Title |
---|---|
BIO 493 | Honors Thesis |
MIC 492 | Honors Directed Study |
MIC 493 | Honors Thesis |
MIC 495 | Undergraduate Research |
MIC 220 | Biology of Microorganisms |
MBB 495 | Undergraduate Research |
BIO 495 | Undergraduate Research |
BDE 799 | Dissertation |
MIC 220 | Biology of Microorganisms |
BDE 792 | Research |
MIC 494 | Special Topics |
2019 Fall
Course Number | Course Title |
---|---|
BIO 492 | Honors Directed Study |
BIO 493 | Honors Thesis |
MBB 492 | Honors Directed Study |
MIC 495 | Undergraduate Research |
BIO 495 | Undergraduate Research |
MBB 495 | Undergraduate Research |
MIC 494 | Special Topics |
American Society for Microbiology (and ASM mentor for international students)
Biogeochemistry and Environmental Complexity – Cornell University
Ecological Society of America
International Society of Microbial Ecology
Society for Advancement of Chicanos and Native Americans in Science
Society of Wetlands Scientist